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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903755.1_cds_XP_016453890.1_47972
CDS Infomation

[gene=LOC107778191] [db_xref=GeneID:107778191] [protein=beta-galactosidase-like] [protein_id=XP_016453890.1] [location=join(54172..54336,54599..54694,54815..54927,55029..55095,55595..55687,55824..55967,57086..57174,57271..57376,57694..57781,57900..58018,58228..58392,58494..58669,59145..59254,59372..59481,59586..59696,60015..60125,60226..60431,60530..60638)] [gbkey=CDS]
Sequence

ATGCTAAGAACAAATGTGTTGCTGCTGCTATTCTTAGTATTATGTTCATTGGTTTTTTCT
TCAGTGAAAGCCACTGTTTCTTACGATGACAGAGCTATACTCATAAATGGGAGAAGAAAA
ATTCTTATTTCTGGTTCTATTCATTACCCAAGAAGCACTCCTGAGATGTGGCCTGATCTT
ATACAAAAGGCAAAAGATGGAGGTTTAGATGTTATTGAGACTTATGTTTTTTGGAATGGG
CATGAACCTTCACCTGGAAAATATAATTTTGAAGGGAGATATGATCTTGTTAAGTTCGTC
AAGTTGGTACAAAAAGCAGGACTTTATGTCAATCTACGTATTGGCCCTTACGTTTGTGCA
GAATGGAACTTTGGGGGATTCCCTGTTTGGCTAAAGTATGTTCCTGGTATGGAATTCAGA
ACAGACAATCAGCCTTTCAAGGTGGCTATGCAAGGATTTGTACAGAGAATAGTCAACATG
ATGAAGTCAGAAAAATTATTTGAACCTCAAGGAGGACCAATAATAATTGCCCAGATAGAA
AATGAGTATGGACCAGTAGAATGGGAAATTGGTGCTCCTGGTAAAGCTTATACAAAATGG
ACTGCTCAAATGGCTGTGAGTCTTGAAACTGGAGTCCCTTGGATTATGTGTAAACAAGAG
GATGCCCCTGATCCTGTGATTGATACCTGCAATGGCTTTTACTGCGAAGGATTCCGTCCC
AATAAGCCTTACAAACCAAAAATGTGGACAGAAGTCTGGACTGGCTGGTATACAAAATTT
GGTGGTCCAGTTCCTCAAAGGCCAGCTGAAGATATTGCATTTTCAGTTGCAAGGTTTGTT
CAGAACAATGGTTCATTCTTCAATTACTACATGTATCATGGAGGAACGAATTTTGGCCGA
ACATCTTCAGGGCTTTTCATTGCAACTAGCTATGATTATGATGCTCCTCTAGATGAGTAT
GGGCTGCTGAATGAACCAAAATATGGGCATTTGAGAGACTTGCATAAAGCAATTAAGCTA
TGTGAACCAGCTTTAGTTTCATCATATCCCACAGTGACTAAGATTGGCAGTAATCAAGAG
GCTCATGTCTTTAGATCAAAATCTGGAAATTGTGCTGCATTTCTATCAAACTACGACTCG
AAATATTCAGTTAAAGTCACATTTCAGAATAAGCCATATGATCTGCCTCCTTGGTCCATC
AGTATTCTTCCTGACTGCAAAACTGCTGTTTATAACACAGCAAAGGTTAGCTCCCGAAGC
TCGAGCATAAAGATGACATCGACAGGTGGTGGACTTTCTTGGCAGTCATATAATGAAGAA
ACTCCGACTGCTGATGACAGCGATACACTTTCAGCAAATGGACTATGGGAACAGAAAAAT
GTCACCAGAGATTCCTCAGACTATCTTTGGTACATGACAGATGTAAATATAGCATCTGAT
GAAGGATTTTTAAAGAATGGAAAGGACCCTTATCTCACTGTTATGTCGGCGGGTCATGTC
TTGCATGTCTTCATCAATGGCAAACTATCAGGAACTGTTTATGGGACATTGGATAGTCCA
AAACTTACATATAGTGGCAATGTGAAATTAAGAGCTGGTATTAACAAGATTTCTCTGCTC
AGTGTTTCTGTTGGTCTCCCGAACGTTGGCGTGCATTTTGATACGTGGAATGCAGGAGTT
CTAGGTCCAGTCACATTGAGTGGTCTCAATGAGGGGAAAAGAGACTTAGCAAAACAGAGA
TGGTCTTACAAGGTTGGTCTAAAAGGTGAATCATTAAGTCTTCATACATTAAGTGGGAGT
TCTTCTGTTGAATGGATTAAAGGTTCACTAGTGGCTCAAAAACAGCCCCTGACTTGGTAC
AAGGCTACATTTAACGCGCCCGGAGGAAGTGACCCTTTAGCTTTAGACATGGCAAGTATG
GGGAAAGGTGAGATATGGATAAATGGCGAAGGCGTAGGTCGCCACTGGCCTGGATATATA
GCACAAGGTGAATGCGGAAAATGCAATTATGCTGGAACATTCAATGAGAAGAAATGTCAA
ACTAATTGCGGACAACCTTCTCAAAGATGGTACCATGTTCCAAGATCATGGCTAAAACCA
AGTGGAAACCTATTGGTAGTATTTGAAGAATGGGGTGGTGATCCAACAGGAATTTCTTTG
GTCAAAAGATCAAGATAA

Peptide Sequence

PEP ID

XP_016453890.1
PEP Infomation

PREDICTED: beta-galactosidase-like [Nicotiana tabacum]
Sequence

MLRTNVLLLLFLVLCSLVFSSVKATVSYDDRAILINGRRKILISGSIHYPRSTPEMWPDL
IQKAKDGGLDVIETYVFWNGHEPSPGKYNFEGRYDLVKFVKLVQKAGLYVNLRIGPYVCA
EWNFGGFPVWLKYVPGMEFRTDNQPFKVAMQGFVQRIVNMMKSEKLFEPQGGPIIIAQIE
NEYGPVEWEIGAPGKAYTKWTAQMAVSLETGVPWIMCKQEDAPDPVIDTCNGFYCEGFRP
NKPYKPKMWTEVWTGWYTKFGGPVPQRPAEDIAFSVARFVQNNGSFFNYYMYHGGTNFGR
TSSGLFIATSYDYDAPLDEYGLLNEPKYGHLRDLHKAIKLCEPALVSSYPTVTKIGSNQE
AHVFRSKSGNCAAFLSNYDSKYSVKVTFQNKPYDLPPWSISILPDCKTAVYNTAKVSSRS
SSIKMTSTGGGLSWQSYNEETPTADDSDTLSANGLWEQKNVTRDSSDYLWYMTDVNIASD
EGFLKNGKDPYLTVMSAGHVLHVFINGKLSGTVYGTLDSPKLTYSGNVKLRAGINKISLL
SVSVGLPNVGVHFDTWNAGVLGPVTLSGLNEGKRDLAKQRWSYKVGLKGESLSLHTLSGS
SSVEWIKGSLVAQKQPLTWYKATFNAPGGSDPLALDMASMGKGEIWINGEGVGRHWPGYI
AQGECGKCNYAGTFNEKKCQTNCGQPSQRWYHVPRSWLKPSGNLLVVFEEWGGDPTGISL
VKRSR

Transcript Sequence

Gene sequence data has not been registered.